Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Gm27275-201ENSMUST00000184318 272 ntBASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav4n-4A0A075B615 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Gm10849-201ENSMUST00000100397 618 ntBASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav4n-4A0A075B615 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms