Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav9-1A0A075B601 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Gm11452-201ENSMUST00000122376 690 ntBASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Gm10819-201ENSMUST00000099988 561 ntBASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav9-1A0A075B601 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Gm45167-201ENSMUST00000208007 322 ntBASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Gm7787-201ENSMUST00000216858 688 ntBASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Rps4l-201ENSMUST00000071745 943 ntBASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9-1A0A075B601 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.52□□□□□ -0.56
Trav9-1A0A075B601 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav9-1A0A075B601 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Trav9-1A0A075B601 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9-1A0A075B601 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9-1A0A075B601 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms