Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.38□□□□□ -0.59
PdfS4R2K0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PdfS4R2K0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PdfS4R2K0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.38□□□□□ -0.59
PdfS4R2K0 Gm12134-201ENSMUST00000122109 520 ntBASIC11.38□□□□□ -0.59
PdfS4R2K0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.38□□□□□ -0.59
PdfS4R2K0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PdfS4R2K0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
PdfS4R2K0 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.38□□□□□ -0.59
PdfS4R2K0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PdfS4R2K0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PdfS4R2K0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
PdfS4R2K0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.37□□□□□ -0.59
PdfS4R2K0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PdfS4R2K0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PdfS4R2K0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PdfS4R2K0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
PdfS4R2K0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.37□□□□□ -0.59
PdfS4R2K0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PdfS4R2K0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.37□□□□□ -0.59
PdfS4R2K0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PdfS4R2K0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.37□□□□□ -0.59
PdfS4R2K0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
PdfS4R2K0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PdfS4R2K0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
PdfS4R2K0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Rprl3-201ENSMUST00000157400 290 ntBASIC11.36□□□□□ -0.59
PdfS4R2K0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PdfS4R2K0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
PdfS4R2K0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms