Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trim3Q9R1R2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Gm5264-201ENSMUST00000190584 848 ntBASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim3Q9R1R2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Gm10499-201ENSMUST00000174094 934 ntBASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.91□□□□□ -0.18
Trim3Q9R1R2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim3Q9R1R2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Gm12134-201ENSMUST00000122109 520 ntBASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim3Q9R1R2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms