Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh17Q9R100 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh17Q9R100 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh17Q9R100 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdh17Q9R100 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh17Q9R100 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh17Q9R100 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh17Q9R100 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh17Q9R100 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh17Q9R100 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.41□□□□□ -0.1
Cdh17Q9R100 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.41□□□□□ -0.1
Cdh17Q9R100 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.41□□□□□ -0.1
Cdh17Q9R100 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.41□□□□□ -0.1
Cdh17Q9R100 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.41□□□□□ -0.1
Cdh17Q9R100 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdh17Q9R100 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.4□□□□□ -0.1
Cdh17Q9R100 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdh17Q9R100 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh17Q9R100 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Gm8749-201ENSMUST00000117737 331 ntBASIC14.39□□□□□ -0.11
Cdh17Q9R100 Gm13036-201ENSMUST00000117799 748 ntBASIC14.39□□□□□ -0.11
Cdh17Q9R100 Gm11452-201ENSMUST00000122376 690 ntBASIC14.39□□□□□ -0.11
Cdh17Q9R100 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh17Q9R100 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms