Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Gm2651-201ENSMUST00000203560 838 ntBASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps29Q9QZ88 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps29Q9QZ88 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Vps29Q9QZ88 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Gm2272-201ENSMUST00000194903 582 ntBASIC14.14□□□□□ -0.15
Vps29Q9QZ88 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.14□□□□□ -0.15
Vps29Q9QZ88 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps29Q9QZ88 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms