Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.55□□□□□ -0.4
Six6Q9QZ28 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.55□□□□□ -0.4
Six6Q9QZ28 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.55□□□□□ -0.4
Six6Q9QZ28 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six6Q9QZ28 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Gm12527-201ENSMUST00000117967 564 ntBASIC12.54□□□□□ -0.4
Six6Q9QZ28 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.54□□□□□ -0.4
Six6Q9QZ28 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.54□□□□□ -0.4
Six6Q9QZ28 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.54□□□□□ -0.4
Six6Q9QZ28 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six6Q9QZ28 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Gm14722-201ENSMUST00000118943 689 ntBASIC12.53□□□□□ -0.4
Six6Q9QZ28 Gm12441-201ENSMUST00000121806 588 ntBASIC12.53□□□□□ -0.4
Six6Q9QZ28 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Gm13474-201ENSMUST00000122466 815 ntBASIC12.53□□□□□ -0.4
Six6Q9QZ28 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.53□□□□□ -0.4
Six6Q9QZ28 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six6Q9QZ28 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.52□□□□□ -0.4
Six6Q9QZ28 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Celf4-206ENSMUST00000224553 1729 ntBASIC12.52□□□□□ -0.41
Six6Q9QZ28 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Six6Q9QZ28 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms