Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trim44Q9QXA7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim44Q9QXA7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim44Q9QXA7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim44Q9QXA7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim44Q9QXA7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim44Q9QXA7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim44Q9QXA7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.11■□□□□ 0.33
Trim44Q9QXA7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Gm27463-201ENSMUST00000183569 57 ntBASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Gm21814-202ENSMUST00000203277 873 ntBASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim44Q9QXA7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms