Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1aQ9QWF0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Chaf1aQ9QWF0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1aQ9QWF0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Gm43347-201ENSMUST00000200226 580 ntBASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1aQ9QWF0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1aQ9QWF0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1aQ9QWF0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.55■□□□□ 0.24
Chaf1aQ9QWF0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1aQ9QWF0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1aQ9QWF0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1aQ9QWF0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms