Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Efs-202ENSMUST00000227037 2540 ntBASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a2Q9JLR1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a2Q9JLR1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Gm11764-201ENSMUST00000120221 623 ntBASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Gm4899-201ENSMUST00000178708 719 ntBASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Gm43514-201ENSMUST00000198852 424 ntBASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a2Q9JLR1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms