Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4bQ9ES00 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4bQ9ES00 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms