Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.71□□□□□ -0.06
Tubb3Q9ERD7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Tubb3Q9ERD7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.71□□□□□ -0.06
Tubb3Q9ERD7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tubb3Q9ERD7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Tubb3Q9ERD7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Gm18489-201ENSMUST00000172565 551 ntBASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Gm2756-201ENSMUST00000195851 400 ntBASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Gm9682-201ENSMUST00000197505 556 ntBASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tubb3Q9ERD7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Gm24513-201ENSMUST00000174964 138 ntBASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Mir3113-201ENSMUST00000175478 76 ntBASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tubb3Q9ERD7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Gm14822-201ENSMUST00000122247 291 ntBASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Gm27300-201ENSMUST00000184085 97 ntBASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Gm27335-201ENSMUST00000184758 97 ntBASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Mir8117-201ENSMUST00000184773 107 ntBASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Gm27397-201ENSMUST00000184997 107 ntBASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tubb3Q9ERD7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms