Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm27703-201ENSMUST00000184836 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm38225-201ENSMUST00000194001 393 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.44■□□□□ 0.7
U2af1Q9D883 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.44■□□□□ 0.7
U2af1Q9D883 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
U2af1Q9D883 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Gm25287-201ENSMUST00000103846 110 ntBASIC19.43■□□□□ 0.7
U2af1Q9D883 Gm22918-201ENSMUST00000103855 110 ntBASIC19.43■□□□□ 0.7
U2af1Q9D883 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC19.43■□□□□ 0.7
U2af1Q9D883 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.43■□□□□ 0.7
U2af1Q9D883 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.43■□□□□ 0.7
U2af1Q9D883 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.43■□□□□ 0.7
U2af1Q9D883 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.43■□□□□ 0.7
U2af1Q9D883 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.43■□□□□ 0.7
U2af1Q9D883 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
U2af1Q9D883 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.43■□□□□ 0.7
U2af1Q9D883 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
U2af1Q9D883 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.42■□□□□ 0.7
U2af1Q9D883 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.42■□□□□ 0.7
U2af1Q9D883 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.42■□□□□ 0.7
U2af1Q9D883 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.42■□□□□ 0.7
U2af1Q9D883 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
U2af1Q9D883 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Mir449b-201ENSMUST00000104833 80 ntBASIC19.42■□□□□ 0.7
U2af1Q9D883 Gm8749-201ENSMUST00000117737 331 ntBASIC19.42■□□□□ 0.7
U2af1Q9D883 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Gm5479-201ENSMUST00000160578 435 ntBASIC19.42■□□□□ 0.7
U2af1Q9D883 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.42■□□□□ 0.7
U2af1Q9D883 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.42■□□□□ 0.7
U2af1Q9D883 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.42■□□□□ 0.7
U2af1Q9D883 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
U2af1Q9D883 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
U2af1Q9D883 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
U2af1Q9D883 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC19.41■□□□□ 0.7
U2af1Q9D883 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.41■□□□□ 0.7
U2af1Q9D883 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
U2af1Q9D883 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.41■□□□□ 0.7
U2af1Q9D883 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
U2af1Q9D883 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.41■□□□□ 0.7
U2af1Q9D883 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.41■□□□□ 0.7
U2af1Q9D883 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.41■□□□□ 0.7
U2af1Q9D883 Gm2451-201ENSMUST00000199447 999 ntBASIC19.41■□□□□ 0.7
U2af1Q9D883 Gm10290-201ENSMUST00000200451 999 ntBASIC19.41■□□□□ 0.7
U2af1Q9D883 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.41■□□□□ 0.7
U2af1Q9D883 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
U2af1Q9D883 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms