Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps33aQ9D2N9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Grk6-205ENSMUST00000224653 2976 ntBASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Gm25406-201ENSMUST00000157599 105 ntBASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps33aQ9D2N9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Gm13436-201ENSMUST00000120418 567 ntBASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Mir1668-201ENSMUST00000184114 107 ntBASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps33aQ9D2N9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Gm26039-201ENSMUST00000158152 144 ntBASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Mir5130-201ENSMUST00000175160 84 ntBASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps33aQ9D2N9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps33aQ9D2N9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps33aQ9D2N9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps33aQ9D2N9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps33aQ9D2N9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms