Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk1aQ9D132 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Upk1aQ9D132 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk1aQ9D132 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk1aQ9D132 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.02□□□□□ -0.16
Upk1aQ9D132 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk1aQ9D132 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk1aQ9D132 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk1aQ9D132 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.02□□□□□ -0.17
Upk1aQ9D132 Gm12644-201ENSMUST00000119935 606 ntBASIC14.02□□□□□ -0.17
Upk1aQ9D132 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Upk1aQ9D132 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk1aQ9D132 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Upk1aQ9D132 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Gm14859-201ENSMUST00000117752 357 ntBASIC14.01□□□□□ -0.17
Upk1aQ9D132 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Upk1aQ9D132 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.01□□□□□ -0.17
Upk1aQ9D132 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk1aQ9D132 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
Upk1aQ9D132 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Upk1aQ9D132 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Gm17807-201ENSMUST00000186869 298 ntBASIC14□□□□□ -0.17
Upk1aQ9D132 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14□□□□□ -0.17
Upk1aQ9D132 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Upk1aQ9D132 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Upk1aQ9D132 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14□□□□□ -0.17
Upk1aQ9D132 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Upk1aQ9D132 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk1aQ9D132 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.99□□□□□ -0.17
Upk1aQ9D132 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.99□□□□□ -0.17
Upk1aQ9D132 Gm6296-201ENSMUST00000222599 943 ntBASIC13.99□□□□□ -0.17
Upk1aQ9D132 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms