Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc80Q9D0F1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.04■□□□□ -0
Ndc80Q9D0F1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.04■□□□□ -0
Ndc80Q9D0F1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.04■□□□□ -0
Ndc80Q9D0F1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc80Q9D0F1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Gm14140-201ENSMUST00000119999 995 ntBASIC15.03■□□□□ -0
Ndc80Q9D0F1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.03■□□□□ -0
Ndc80Q9D0F1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ndc80Q9D0F1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc80Q9D0F1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.02■□□□□ -0
Ndc80Q9D0F1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.02■□□□□ -0
Ndc80Q9D0F1 Psmb5-202ENSMUST00000227257 622 ntBASIC15.02■□□□□ -0
Ndc80Q9D0F1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc80Q9D0F1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ndc80Q9D0F1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms