Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Gm27331-201ENSMUST00000183705 60 ntBASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Gm10608-202ENSMUST00000213924 676 ntBASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd1Q9D0E3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Gm21470-201ENSMUST00000187680 696 ntBASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Gm29705-201ENSMUST00000212598 474 ntBASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd1Q9D0E3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Gm19078-201ENSMUST00000206311 727 ntBASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd1Q9D0E3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm13689-201ENSMUST00000119360 685 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm10156-201ENSMUST00000122364 462 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm27438-201ENSMUST00000183480 110 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm27682-201ENSMUST00000183930 110 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm43094-201ENSMUST00000196549 921 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm6983-201ENSMUST00000214912 628 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms