Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ssbp3Q9D032 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp3Q9D032 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.34□□□□□ -0.43
Ssbp3Q9D032 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp3Q9D032 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Celf4-206ENSMUST00000224553 1729 ntBASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Gm11745-201ENSMUST00000121669 448 ntBASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssbp3Q9D032 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Gm14701-201ENSMUST00000117156 348 ntBASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Gm43767-201ENSMUST00000198933 381 ntBASIC12.31□□□□□ -0.44
Ssbp3Q9D032 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssbp3Q9D032 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms