Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Shmt2Q9CZN7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shmt2Q9CZN7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Gm8318-201ENSMUST00000182954 872 ntBASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Gm6443-201ENSMUST00000203599 874 ntBASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shmt2Q9CZN7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt2Q9CZN7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms