Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hdhd3Q9CYW4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Gm45328-201ENSMUST00000210942 917 ntBASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.05□□□□□ -0.48
Hdhd3Q9CYW4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Gm8318-201ENSMUST00000182954 872 ntBASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hdhd3Q9CYW4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Gm25745-201ENSMUST00000174945 133 ntBASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Gm44454-201ENSMUST00000198541 138 ntBASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.03□□□□□ -0.48
Hdhd3Q9CYW4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms