Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Khdc3Q9CWU5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Khdc3Q9CWU5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Khdc3Q9CWU5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Khdc3Q9CWU5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms