Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf135Q9CWS1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Gm13036-201ENSMUST00000117799 748 ntBASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Gm24513-201ENSMUST00000174964 138 ntBASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf135Q9CWS1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.39■□□□□ 0.06
Rnf135Q9CWS1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Rnf135Q9CWS1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Gm9727-201ENSMUST00000161387 555 ntBASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Gm27397-201ENSMUST00000184997 107 ntBASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf135Q9CWS1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf135Q9CWS1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms