Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm7Q9CQQ8 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.93□□□□□ -0.02
Lsm7Q9CQQ8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm7Q9CQQ8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Auts2-212ENSMUST00000178555 309 ntBASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Gm18049-201ENSMUST00000208909 581 ntBASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Gm5779-201ENSMUST00000218467 910 ntBASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm7Q9CQQ8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Asic1-205ENSMUST00000228185 1818 ntBASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lsm7Q9CQQ8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm7Q9CQQ8 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.89□□□□□ -0.03
Lsm7Q9CQQ8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm7Q9CQQ8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm7Q9CQQ8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm7Q9CQQ8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm7Q9CQQ8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms