Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nipsnap3bQ9CQE1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nipsnap3bQ9CQE1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Gm34391-201ENSMUST00000203706 907 ntBASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nipsnap3bQ9CQE1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Nipsnap3bQ9CQE1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nipsnap3bQ9CQE1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nipsnap3bQ9CQE1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.58□□□□□ -0.07
Nipsnap3bQ9CQE1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nipsnap3bQ9CQE1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nipsnap3bQ9CQE1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nipsnap3bQ9CQE1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm15173-201ENSMUST00000122049 433 ntBASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nipsnap3bQ9CQE1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms