Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Gm6912-201ENSMUST00000117218 544 ntBASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Gm27989-201ENSMUST00000184721 107 ntBASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Gm9794-201ENSMUST00000202370 423 ntBASIC12.13□□□□□ -0.47
Prpf8Q99PV0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prpf8Q99PV0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.12□□□□□ -0.47
Prpf8Q99PV0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prpf8Q99PV0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.11□□□□□ -0.47
Prpf8Q99PV0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Gm18766-201ENSMUST00000189811 808 ntBASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Prpf8Q99PV0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms