Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn4Q99P72 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.01■□□□□ 0.63
Rtn4Q99P72 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rtn4Q99P72 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rtn4Q99P72 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Gm10584-201ENSMUST00000207036 2628 ntBASIC19■□□□□ 0.63
Rtn4Q99P72 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19■□□□□ 0.63
Rtn4Q99P72 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rtn4Q99P72 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19■□□□□ 0.63
Rtn4Q99P72 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19■□□□□ 0.63
Rtn4Q99P72 Gm22993-201ENSMUST00000175423 254 ntBASIC19■□□□□ 0.63
Rtn4Q99P72 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC19■□□□□ 0.63
Rtn4Q99P72 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19■□□□□ 0.63
Rtn4Q99P72 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19■□□□□ 0.63
Rtn4Q99P72 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19■□□□□ 0.63
Rtn4Q99P72 Gm5184-201ENSMUST00000220417 1702 ntBASIC19■□□□□ 0.63
Rtn4Q99P72 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtn4Q99P72 Gm5366-201ENSMUST00000215494 1338 ntBASIC19■□□□□ 0.63
Rtn4Q99P72 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Gm3344-201ENSMUST00000169610 603 ntBASIC18.99■□□□□ 0.63
Rtn4Q99P72 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Gm37604-201ENSMUST00000191749 1272 ntBASIC18.99■□□□□ 0.63
Rtn4Q99P72 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.99■□□□□ 0.63
Rtn4Q99P72 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.99■□□□□ 0.63
Rtn4Q99P72 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.99■□□□□ 0.63
Rtn4Q99P72 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtn4Q99P72 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.99■□□□□ 0.63
Rtn4Q99P72 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.98■□□□□ 0.63
Rtn4Q99P72 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rtn4Q99P72 CT009713.1-201ENSMUST00000224828 853 ntBASIC18.98■□□□□ 0.63
Rtn4Q99P72 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtn4Q99P72 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms