Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.53■□□□□ 0.08
Clp1Q99LI9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.53■□□□□ 0.08
Clp1Q99LI9 Gm37444-201ENSMUST00000193605 439 ntBASIC15.53■□□□□ 0.08
Clp1Q99LI9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Clp1Q99LI9 Gm18062-201ENSMUST00000208020 547 ntBASIC15.53■□□□□ 0.08
Clp1Q99LI9 Gm18055-201ENSMUST00000208254 547 ntBASIC15.53■□□□□ 0.08
Clp1Q99LI9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Clp1Q99LI9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clp1Q99LI9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clp1Q99LI9 Mir125a-201ENSMUST00000083545 68 ntBASIC15.53■□□□□ 0.08
Clp1Q99LI9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clp1Q99LI9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clp1Q99LI9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Clp1Q99LI9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Clp1Q99LI9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Clp1Q99LI9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.52■□□□□ 0.08
Clp1Q99LI9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Clp1Q99LI9 AA619741-201ENSMUST00000195095 646 ntBASIC15.52■□□□□ 0.08
Clp1Q99LI9 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.52■□□□□ 0.08
Clp1Q99LI9 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.52■□□□□ 0.08
Clp1Q99LI9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clp1Q99LI9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clp1Q99LI9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clp1Q99LI9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.51■□□□□ 0.07
Clp1Q99LI9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.51■□□□□ 0.07
Clp1Q99LI9 Gm11918-201ENSMUST00000121660 179 ntBASIC15.51■□□□□ 0.07
Clp1Q99LI9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.51■□□□□ 0.07
Clp1Q99LI9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Dancr-204ENSMUST00000132389 2347 ntBASIC15.51■□□□□ 0.07
Clp1Q99LI9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clp1Q99LI9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.5■□□□□ 0.07
Clp1Q99LI9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Gm19220-201ENSMUST00000222682 803 ntBASIC15.5■□□□□ 0.07
Clp1Q99LI9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Clp1Q99LI9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.5■□□□□ 0.07
Clp1Q99LI9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Clp1Q99LI9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Clp1Q99LI9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Clp1Q99LI9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Clp1Q99LI9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.49■□□□□ 0.07
Clp1Q99LI9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Clp1Q99LI9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Clp1Q99LI9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.49■□□□□ 0.07
Clp1Q99LI9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Clp1Q99LI9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms