Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf3Q99LI7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Gm4899-201ENSMUST00000178708 719 ntBASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Gm5864-201ENSMUST00000202263 970 ntBASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cstf3Q99LI7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Gm12134-201ENSMUST00000122109 520 ntBASIC14.29□□□□□ -0.12
Cstf3Q99LI7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cstf3Q99LI7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Gm13036-201ENSMUST00000117799 748 ntBASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms