Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Gm26399-201ENSMUST00000103937 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm25349-201ENSMUST00000177728 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm23616-201ENSMUST00000177797 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm25871-201ENSMUST00000177816 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm24752-201ENSMUST00000178240 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm24496-201ENSMUST00000178287 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm25649-201ENSMUST00000178476 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm25548-201ENSMUST00000178681 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm23147-201ENSMUST00000178841 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm26095-201ENSMUST00000179270 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm22171-201ENSMUST00000179283 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm23936-201ENSMUST00000179354 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm22619-201ENSMUST00000179516 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm25255-201ENSMUST00000179579 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm24755-201ENSMUST00000179691 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm26506-201ENSMUST00000179692 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm25086-201ENSMUST00000179931 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm23243-201ENSMUST00000180047 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm24659-201ENSMUST00000180212 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm24169-201ENSMUST00000180244 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm23689-201ENSMUST00000180354 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm27359-201ENSMUST00000184153 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm27785-201ENSMUST00000184268 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm27466-201ENSMUST00000184396 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm27703-201ENSMUST00000184836 110 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm2451-201ENSMUST00000199447 999 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm10290-201ENSMUST00000200451 999 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp16Q99LG0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp16Q99LG0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.88■□□□□ 0.61
Usp16Q99LG0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp16Q99LG0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp16Q99LG0 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.87■□□□□ 0.61
Usp16Q99LG0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Usp16Q99LG0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Mir449b-201ENSMUST00000104833 80 ntBASIC18.86■□□□□ 0.61
Usp16Q99LG0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.86■□□□□ 0.61
Usp16Q99LG0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.86■□□□□ 0.61
Usp16Q99LG0 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.86■□□□□ 0.61
Usp16Q99LG0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp16Q99LG0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Gm9726-201ENSMUST00000180321 678 ntBASIC18.85■□□□□ 0.61
Usp16Q99LG0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp16Q99LG0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.85■□□□□ 0.61
Usp16Q99LG0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms