Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.15■□□□□ 0.5
RtcbQ99LF4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.15■□□□□ 0.5
RtcbQ99LF4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Gm11425-201ENSMUST00000119608 498 ntBASIC18.15■□□□□ 0.5
RtcbQ99LF4 Gm15393-201ENSMUST00000120499 219 ntBASIC18.15■□□□□ 0.5
RtcbQ99LF4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Gm33320-201ENSMUST00000192232 530 ntBASIC18.15■□□□□ 0.5
RtcbQ99LF4 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.15■□□□□ 0.5
RtcbQ99LF4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Gm9396-201ENSMUST00000076703 567 ntBASIC18.15■□□□□ 0.5
RtcbQ99LF4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RtcbQ99LF4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RtcbQ99LF4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RtcbQ99LF4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RtcbQ99LF4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.14■□□□□ 0.5
RtcbQ99LF4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Gm27701-201ENSMUST00000184498 110 ntBASIC18.14■□□□□ 0.49
RtcbQ99LF4 Mir6420-201ENSMUST00000185032 102 ntBASIC18.14■□□□□ 0.49
RtcbQ99LF4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RtcbQ99LF4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.13■□□□□ 0.49
RtcbQ99LF4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Gm5354-201ENSMUST00000182417 973 ntBASIC18.13■□□□□ 0.49
RtcbQ99LF4 Gm28911-201ENSMUST00000188837 117 ntBASIC18.13■□□□□ 0.49
RtcbQ99LF4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RtcbQ99LF4 BC001981-202ENSMUST00000191393 1545 ntBASIC18.13■□□□□ 0.49
RtcbQ99LF4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RtcbQ99LF4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Gm4984-201ENSMUST00000115987 360 ntBASIC18.12■□□□□ 0.49
RtcbQ99LF4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.12■□□□□ 0.49
RtcbQ99LF4 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.12■□□□□ 0.49
RtcbQ99LF4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms