Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd3Q99LE3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd3Q99LE3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd3Q99LE3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.33■□□□□ 0.05
Lysmd3Q99LE3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd3Q99LE3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd3Q99LE3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd3Q99LE3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd3Q99LE3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Lysmd3Q99LE3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm22065-201ENSMUST00000103753 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm22066-201ENSMUST00000103761 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm24932-201ENSMUST00000103763 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm24115-201ENSMUST00000103799 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm22190-201ENSMUST00000103827 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm22191-201ENSMUST00000103831 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm24721-201ENSMUST00000103849 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm28018-201ENSMUST00000103869 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm26399-201ENSMUST00000103937 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm2810-201ENSMUST00000118681 990 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm13616-201ENSMUST00000120600 222 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm25349-201ENSMUST00000177728 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm23616-201ENSMUST00000177797 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm25871-201ENSMUST00000177816 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm24752-201ENSMUST00000178240 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm24496-201ENSMUST00000178287 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm25649-201ENSMUST00000178476 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm25548-201ENSMUST00000178681 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm23147-201ENSMUST00000178841 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm26095-201ENSMUST00000179270 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm22171-201ENSMUST00000179283 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm23936-201ENSMUST00000179354 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm22619-201ENSMUST00000179516 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm25255-201ENSMUST00000179579 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm24755-201ENSMUST00000179691 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm26506-201ENSMUST00000179692 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm25086-201ENSMUST00000179931 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm23243-201ENSMUST00000180047 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm24659-201ENSMUST00000180212 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm24169-201ENSMUST00000180244 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm23689-201ENSMUST00000180354 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm27359-201ENSMUST00000184153 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm27785-201ENSMUST00000184268 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm27466-201ENSMUST00000184396 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm27703-201ENSMUST00000184836 110 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd3Q99LE3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms