Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm21749-201ENSMUST00000189343 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm21901-201ENSMUST00000189568 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm29424-201ENSMUST00000189716 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm28599-201ENSMUST00000189838 694 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm21867-201ENSMUST00000189917 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm29269-201ENSMUST00000190087 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm21722-201ENSMUST00000190153 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm28423-201ENSMUST00000190701 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm21899-201ENSMUST00000190745 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm21910-201ENSMUST00000191163 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm21849-201ENSMUST00000191571 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm28678-201ENSMUST00000191593 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm20910-201ENSMUST00000193268 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Gm21871-201ENSMUST00000194621 696 ntBASIC17.42■□□□□ 0.38
Col20a1Q923P0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col20a1Q923P0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col20a1Q923P0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col20a1Q923P0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col20a1Q923P0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Gm27321-201ENSMUST00000185021 205 ntBASIC17.41■□□□□ 0.38
Col20a1Q923P0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col20a1Q923P0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Gm24543-201ENSMUST00000103867 82 ntBASIC17.4■□□□□ 0.38
Col20a1Q923P0 Gm12151-201ENSMUST00000121374 290 ntBASIC17.4■□□□□ 0.38
Col20a1Q923P0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Mir8102-201ENSMUST00000184148 139 ntBASIC17.4■□□□□ 0.38
Col20a1Q923P0 Gm37230-201ENSMUST00000194491 818 ntBASIC17.4■□□□□ 0.38
Col20a1Q923P0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.4■□□□□ 0.38
Col20a1Q923P0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.4■□□□□ 0.38
Col20a1Q923P0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col20a1Q923P0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col20a1Q923P0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Mir7684-201ENSMUST00000183858 60 ntBASIC17.39■□□□□ 0.37
Col20a1Q923P0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col20a1Q923P0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col20a1Q923P0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms