Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.09■□□□□ 0.33
Smc1bQ920F6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.08■□□□□ 0.33
Smc1bQ920F6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc1bQ920F6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc1bQ920F6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc1bQ920F6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.08■□□□□ 0.33
Smc1bQ920F6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc1bQ920F6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.08■□□□□ 0.33
Smc1bQ920F6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smc1bQ920F6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Gm5779-201ENSMUST00000218467 910 ntBASIC17.08■□□□□ 0.32
Smc1bQ920F6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.08■□□□□ 0.32
Smc1bQ920F6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc1bQ920F6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc1bQ920F6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Gm16198-201ENSMUST00000118766 670 ntBASIC17.06■□□□□ 0.32
Smc1bQ920F6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smc1bQ920F6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.06■□□□□ 0.32
Smc1bQ920F6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.06■□□□□ 0.32
Smc1bQ920F6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smc1bQ920F6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.05■□□□□ 0.32
Smc1bQ920F6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc1bQ920F6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms