Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha3Q91Y16 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Carlr-201ENSMUST00000181515 2574 ntBASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Gm27397-201ENSMUST00000184997 107 ntBASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdha3Q91Y16 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha3Q91Y16 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha3Q91Y16 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Pcdha3Q91Y16 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha3Q91Y16 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha3Q91Y16 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.46■□□□□ 0.06
Pcdha3Q91Y16 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha3Q91Y16 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha3Q91Y16 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms