Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha8Q91Y12 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha8Q91Y12 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha8Q91Y12 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdha8Q91Y12 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdha8Q91Y12 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Gm27300-201ENSMUST00000184085 97 ntBASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Gm27335-201ENSMUST00000184758 97 ntBASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdha8Q91Y12 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha8Q91Y12 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha8Q91Y12 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha8Q91Y12 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha8Q91Y12 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms