Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb6Q91XZ4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Gm44492-201ENSMUST00000197012 141 ntBASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Olfr286-202ENSMUST00000205305 969 ntBASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb6Q91XZ4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Gm44771-201ENSMUST00000206975 626 ntBASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb6Q91XZ4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Gm11779-201ENSMUST00000118541 368 ntBASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Gm12260-201ENSMUST00000122447 411 ntBASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Rpph1-201ENSMUST00000175096 319 ntBASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 AW822252-206ENSMUST00000208904 237 ntBASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb6Q91XZ4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms