Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Gm11950-201ENSMUST00000121615 838 ntBASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Gm43767-201ENSMUST00000198933 381 ntBASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Grk6-207ENSMUST00000225925 2769 ntBASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab40cQ8VHQ4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Rab40cQ8VHQ4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab40cQ8VHQ4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab40cQ8VHQ4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab40cQ8VHQ4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab40cQ8VHQ4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.08□□□□□ -0.48
Rab40cQ8VHQ4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms