Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.42■□□□□ 0.22
Ddx39aQ8VDW0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Gm12151-201ENSMUST00000121374 290 ntBASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx39aQ8VDW0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Gm5479-201ENSMUST00000160578 435 ntBASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Gm18766-201ENSMUST00000189811 808 ntBASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Gm6888-201ENSMUST00000221983 706 ntBASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ddx39aQ8VDW0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ddx39aQ8VDW0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx39aQ8VDW0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms