Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm1Q8VC85 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.19□□□□□ -0.14
Lsm1Q8VC85 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.19□□□□□ -0.14
Lsm1Q8VC85 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm1Q8VC85 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Gm7153-201ENSMUST00000117092 455 ntBASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 AV026068-213ENSMUST00000223675 1171 ntBASIC14.18□□□□□ -0.14
Lsm1Q8VC85 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm1Q8VC85 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Gm17971-201ENSMUST00000190239 806 ntBASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm1Q8VC85 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms