Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rpap2Q8VC34 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.21■□□□□ 0.19
Rpap2Q8VC34 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rpap2Q8VC34 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.21■□□□□ 0.18
Rpap2Q8VC34 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Rpap2Q8VC34 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rpap2Q8VC34 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rpap2Q8VC34 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Gm2451-201ENSMUST00000199447 999 ntBASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Gm10290-201ENSMUST00000200451 999 ntBASIC16.2■□□□□ 0.18
Rpap2Q8VC34 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpap2Q8VC34 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Olfr286-202ENSMUST00000205305 969 ntBASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Gm45612-201ENSMUST00000211320 160 ntBASIC16.19■□□□□ 0.18
Rpap2Q8VC34 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpap2Q8VC34 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms