Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Gm9385-201ENSMUST00000117563 472 ntBASIC13.7□□□□□ -0.22
Rfc3Q8R323 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Gm27494-201ENSMUST00000184735 189 ntBASIC13.7□□□□□ -0.22
Rfc3Q8R323 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.7□□□□□ -0.22
Rfc3Q8R323 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfc3Q8R323 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Gm11745-201ENSMUST00000121669 448 ntBASIC13.69□□□□□ -0.22
Rfc3Q8R323 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.69□□□□□ -0.22
Rfc3Q8R323 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.69□□□□□ -0.22
Rfc3Q8R323 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.69□□□□□ -0.22
Rfc3Q8R323 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rfc3Q8R323 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.68□□□□□ -0.22
Rfc3Q8R323 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Gm11025-201ENSMUST00000140773 466 ntBASIC13.68□□□□□ -0.22
Rfc3Q8R323 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.68□□□□□ -0.22
Rfc3Q8R323 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rfc3Q8R323 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms