Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Gm2272-201ENSMUST00000194903 582 ntBASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.89■□□□□ 0.29
Trim29Q8R2Q0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim29Q8R2Q0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim29Q8R2Q0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Gm13597-201ENSMUST00000121239 375 ntBASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Gm1401-201ENSMUST00000122048 772 ntBASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim29Q8R2Q0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim29Q8R2Q0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms