Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nudcd3Q8R1N4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Gm43767-201ENSMUST00000198933 381 ntBASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nudcd3Q8R1N4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nudcd3Q8R1N4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nudcd3Q8R1N4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nudcd3Q8R1N4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms