Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Gm9385-201ENSMUST00000117563 472 ntBASIC17.44■□□□□ 0.38
Atf7Q8R0S1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atf7Q8R0S1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atf7Q8R0S1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Gm2451-201ENSMUST00000199447 999 ntBASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Gm10290-201ENSMUST00000200451 999 ntBASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Gm18206-201ENSMUST00000207027 926 ntBASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Atf7Q8R0S1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atf7Q8R0S1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms