Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Gm29361-201ENSMUST00000183323 2000 ntBASIC9.42□□□□□ -0.9
Smim29Q8R043 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 AC159649.2-201ENSMUST00000222984 3223 ntBASIC9.42□□□□□ -0.9
Smim29Q8R043 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
Smim29Q8R043 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smim29Q8R043 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Smim29Q8R043 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC9.41□□□□□ -0.9
Smim29Q8R043 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Gm43205-201ENSMUST00000198622 1968 ntBASIC9.41□□□□□ -0.9
Smim29Q8R043 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Smim29Q8R043 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim29Q8R043 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC9.41□□□□□ -0.9
Smim29Q8R043 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.41□□□□□ -0.9
Smim29Q8R043 Gm5253-201ENSMUST00000187104 1025 ntBASIC9.41□□□□□ -0.9
Smim29Q8R043 Gm6089-201ENSMUST00000197666 938 ntBASIC9.41□□□□□ -0.9
Smim29Q8R043 AC151836.1-202ENSMUST00000226259 753 ntBASIC9.41□□□□□ -0.9
Smim29Q8R043 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Smim29Q8R043 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 AC130669.1-201ENSMUST00000228537 1672 ntBASIC9.41□□□□□ -0.9
Smim29Q8R043 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim29Q8R043 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim29Q8R043 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC9.41□□□□□ -0.9
Smim29Q8R043 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Smim29Q8R043 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smim29Q8R043 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Smim29Q8R043 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smim29Q8R043 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smim29Q8R043 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Smim29Q8R043 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smim29Q8R043 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smim29Q8R043 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms