Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf4Q8K4J2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Mir770-201ENSMUST00000103252 94 ntBASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.49□□□□□ -0.25
Ebf4Q8K4J2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Gm27389-201ENSMUST00000183622 195 ntBASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf4Q8K4J2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf4Q8K4J2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms