Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Gm8749-201ENSMUST00000117737 331 ntBASIC16.65■□□□□ 0.26
Syne4Q8CII8 Gm15806-201ENSMUST00000120696 955 ntBASIC16.65■□□□□ 0.26
Syne4Q8CII8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Gm17150-201ENSMUST00000165577 381 ntBASIC16.65■□□□□ 0.26
Syne4Q8CII8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Gm9899-201ENSMUST00000065519 555 ntBASIC16.65■□□□□ 0.26
Syne4Q8CII8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Syne4Q8CII8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Syne4Q8CII8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Syne4Q8CII8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne4Q8CII8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.63■□□□□ 0.25
Syne4Q8CII8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Gm37230-201ENSMUST00000194491 818 ntBASIC16.63■□□□□ 0.25
Syne4Q8CII8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Gm19220-201ENSMUST00000222682 803 ntBASIC16.63■□□□□ 0.25
Syne4Q8CII8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.63■□□□□ 0.25
Syne4Q8CII8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.63■□□□□ 0.25
Syne4Q8CII8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne4Q8CII8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.62■□□□□ 0.25
Syne4Q8CII8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Gm6916-202ENSMUST00000205523 195 ntBASIC16.62■□□□□ 0.25
Syne4Q8CII8 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.62■□□□□ 0.25
Syne4Q8CII8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.62■□□□□ 0.25
Syne4Q8CII8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.62■□□□□ 0.25
Syne4Q8CII8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syne4Q8CII8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.61■□□□□ 0.25
Syne4Q8CII8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.61■□□□□ 0.25
Syne4Q8CII8 Mir1938-201ENSMUST00000158746 100 ntBASIC16.61■□□□□ 0.25
Syne4Q8CII8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Olfr286-202ENSMUST00000205305 969 ntBASIC16.61■□□□□ 0.25
Syne4Q8CII8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syne4Q8CII8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms