Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sox30Q8CGW4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Gm45167-201ENSMUST00000208007 322 ntBASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sox30Q8CGW4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Birc2-201ENSMUST00000054878 378 ntBASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox30Q8CGW4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sox30Q8CGW4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.14■□□□□ 0.17
Sox30Q8CGW4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Gm34391-201ENSMUST00000203706 907 ntBASIC16.14■□□□□ 0.17
Sox30Q8CGW4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Sox30Q8CGW4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox30Q8CGW4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms