Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ShfQ8CG80 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.21□□□□□ -0.3
ShfQ8CG80 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ShfQ8CG80 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.21□□□□□ -0.3
ShfQ8CG80 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Gm8749-201ENSMUST00000117737 331 ntBASIC13.2□□□□□ -0.3
ShfQ8CG80 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Gm7230-201ENSMUST00000173026 815 ntBASIC13.2□□□□□ -0.3
ShfQ8CG80 Gm28033-201ENSMUST00000184224 96 ntBASIC13.2□□□□□ -0.3
ShfQ8CG80 Gm43347-201ENSMUST00000200226 580 ntBASIC13.2□□□□□ -0.3
ShfQ8CG80 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.2□□□□□ -0.3
ShfQ8CG80 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Birc2-201ENSMUST00000054878 378 ntBASIC13.2□□□□□ -0.3
ShfQ8CG80 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
ShfQ8CG80 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShfQ8CG80 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.2□□□□□ -0.3
ShfQ8CG80 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Gm27459-201ENSMUST00000184860 107 ntBASIC13.19□□□□□ -0.3
ShfQ8CG80 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Rps4l-201ENSMUST00000071745 943 ntBASIC13.19□□□□□ -0.3
ShfQ8CG80 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShfQ8CG80 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ShfQ8CG80 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ShfQ8CG80 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.18□□□□□ -0.3
ShfQ8CG80 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.18□□□□□ -0.3
ShfQ8CG80 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.18□□□□□ -0.3
ShfQ8CG80 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ShfQ8CG80 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ShfQ8CG80 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.18□□□□□ -0.3
ShfQ8CG80 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShfQ8CG80 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ShfQ8CG80 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.18□□□□□ -0.3
ShfQ8CG80 Gm34391-201ENSMUST00000203706 907 ntBASIC13.18□□□□□ -0.3
ShfQ8CG80 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.18□□□□□ -0.3
ShfQ8CG80 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms