Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Gm13464-201ENSMUST00000119418 935 ntBASIC18.3■□□□□ 0.52
Smc5Q8CG46 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.3■□□□□ 0.52
Smc5Q8CG46 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.3■□□□□ 0.52
Smc5Q8CG46 Gm7787-201ENSMUST00000216858 688 ntBASIC18.3■□□□□ 0.52
Smc5Q8CG46 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc5Q8CG46 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc5Q8CG46 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc5Q8CG46 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.28■□□□□ 0.52
Smc5Q8CG46 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Gm9726-201ENSMUST00000180321 678 ntBASIC18.28■□□□□ 0.52
Smc5Q8CG46 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.28■□□□□ 0.52
Smc5Q8CG46 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.28■□□□□ 0.52
Smc5Q8CG46 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smc5Q8CG46 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Gm6550-201ENSMUST00000187574 993 ntBASIC18.27■□□□□ 0.52
Smc5Q8CG46 Gm43347-201ENSMUST00000200226 580 ntBASIC18.27■□□□□ 0.52
Smc5Q8CG46 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.27■□□□□ 0.52
Smc5Q8CG46 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.27■□□□□ 0.52
Smc5Q8CG46 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc5Q8CG46 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc5Q8CG46 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc5Q8CG46 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Smc5Q8CG46 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc5Q8CG46 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc5Q8CG46 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc5Q8CG46 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.26■□□□□ 0.51
Smc5Q8CG46 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc5Q8CG46 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms